|
Class Summary |
| AlleleAssoc |
Creates a form that does a basic --assoc test |
| AlleleFreq |
Create a form that allows the user to test for Allele
frequency. |
| Basic |
Create a form that will provide basic summery
statistics for a file set. |
| CCAssoc |
|
| Clustering |
Form for the clustering command --cluster |
| FamAssoc |
|
| GenFileSet |
Reformat a fileset. |
| HapCCAssoc |
A form that allows the user to create a Haplotype-based C/C test plink
command line |
| HaploFreq |
|
| HaploPhase |
|
| HapTDTAssoc |
A haplotype, family based association test form. |
| HardyWinEq |
Create a form that checks the hardy weinburg
equalibrium of a given data set. |
| HomozRuns |
|
| IBSdist |
Create an ibs distance matrix form. |
| IndHetz |
|
| MendelErr |
|
| Merge |
Merge two file sets. |
| Missing |
Create a Form to test for missing data using PLINK "--missing". |
| NearNeigh |
Allow the user to create a nearest neighbour command. |
| QuantTrtInt |
A Quantitative trait interaction form. |
| Regression |
A linear/logistic regression form. |
| SetAssoc |
A Set based association file. |
| StratAnaly |
|
| Validate |
Create a form that will provide basic summery
statistics for a file set. |